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S. SIVAKUMAR


ADDRESS:
Plot No. 5J, Kamatchi Amman Avenue Phase I,
Near Temple City, Velingapatarai, Kanchipuram 631 502
Phone: 9865866168 Email: sivabio@gmail.com 

OBJECTIVE:    Being good Lecturer, Scientist and good human being



EXPERIENCE:

2000-2018    Sri Sankara Arts and Science College, Enathur, Kanchipuram.
Associate Professor in Biochemistry
- Eighteen Years Teaching Experience
- Both UG and PG classes Handled
- Projects and Comprehensive viva guided for PG students
Papers Handled:
- Immunology
- Molecular Biology
- Bioinformatics
- Cell Biology
- Clinical Biochemistry
- Chemistry of Biomolecules
- Nutritional Biochemistry
- Enzymes
 
2002-2005    Sri Sankara Arts and Science College, Enathur, Kanchipuram.
NSS Programme Officer
- Orientation course attended
- Three Special Camps conducted
- Orientation course conducted for volunteers

2004-2018    Sri Sankara Arts and Science College, Enathur, Kanchipuram.
Teaching Faculty for Environmental Studies
- Five day workshop attended at Academic Staff College, University of Madras
- Classes handled for all UG students
- Field visit arranged

2003-2018    Sri Sankara Arts and Science College, Enathur, Kanchipuram.
Teaching Faculty for Bioinformatics
- 260 Students trained in Advanced Diploma in Bioinformatic course
- More than hundred projects guided
- Promoted as Co-ordinator for Bioinformatic course from 2009


EDUCATION:

1. 2008-2013 - University of Madras, Chennai.
Ph D
- Cancer Biology
- Bioinformatics
-Thesis Titled "Expression of Osteopontin-D in Breast Cancer Patients: Identification of a new osteopontin splice variant"

2. 2003-2004    Manonmaniam Sundaranar University, Thirunelveli.
M. Phil (Life Science)
- First Class (67.7%)
- INVITRO STUDIES OF A PROTEASE OF Shigella flexneri A VIRULANT FACTOR --- Project carried out in Madras University

3. 1998-2000    University of Madras, Chennai.
M. Sc (Biochemistry)
- First Class with Distinction (84.6%)
-Effect of anti-obese Drug OB 200 against obesityProject title.

4. 1993-1996    Sri Sankara Arts and Science College, Enathur, Kanchipuram.
B. Sc (Biochemistry)
- First Class with Distinction (82.8%)
- Best outgoing student award received

5. 2004-2005    Bioinformatic Institue of India (BII), Pune.
Postgraduate Diploma in Bio-Informatics (PGDBI)
- First Class with "A" grade (72.5%)
- One year course

6. 2004-2005    SSI, Kanchipuram.
Diploma in Advanced Aplications in Programming (DAAP)
- First Class (72%)
- One year course
- HTML, Visual Basic, Java Script, C, C++, MS Office, SQL, Linux, VB script and RDBMS

7. 2007-2008    Nano-science and Technology Consortium (NSTC), Pune.
Certificate Course in Nanoscience (CCNS)
- Sixth Month Course


TECHNICAL QUALIFICATIONS:
1. Typewriting
Higher passed in Both Tamil and English
2. Shorthand
Lower passed in English


RESEARCH SCHOLARSHIPS:
1. ICAR M. Sc., JRF - 1997
2. ICMR JRF - 2001
3. CSIR-UGC-JRF-NET - 2001


TRAINING:
1. Ten days Orientation course in NSS
2. Five days training for Teaching methodology in Environmental studies
3. Ten days Hands on training for Bioinformatics
4. Five days Short term course on Total Quality Management
5. Twenty one days Refresher course on Nanoscience
6. Google power searching course completed


BOOKS PUBLISHED:
1. Bioinformatics: Databases and Programming Languages (ISBN 978-9380479-19-4)
2. Bioinformatics: Sequence analysis and Drug Designing (ISBN 978-9380479-18-7)
3. Childhood Asthma: Antioxidant Diagnosis and Management (ISBN 978-3-8454-3096-6)
4. Physiology of Cell (ISBN 978-3-8454-4057-6)
5. Principles of Aanalytical Chemistry (ISBN 978-9381992-97-5)
6. Plant Biohemistry (ISBN 978-93-85640-31-5)


DATABASE SEQUENCE PUBLISHED:
1. Cucumis sativus ascorbate peroxidase-like gene,partial sequence (HM053977.1)
2. Momordica charantia ascorbate peroxidase-like gene, partial sequence  (HM053978.1)
3. Bacillus subtilis strain AL2 alkaline lipase-like gene, complete sequence (HM053975.1)
4. Bacillus subtilis strain AL2 16S ribosomal RNA gene, partial sequence (HM053974.1)
5. Nucleotide sequence of Homo sapiens osteopontin-C mRNA, partial cds (HQ874460.1)
6. Nucleotide sequence of Homo sapiens osteopontin-D mRNA, partial cds (HQ874461.1)
7. Nucleotide sequence of Homo sapiens matrix metalloproteinase-9 mRNA, partial cds (HQ874462.1)
8. Nucleotide sequence of Homo sapiens osteopontin-D mRNA, complete cds (JF412666.1)
9. Nucleotide sequence of Homo sapiens osteopontin-C mRNA, complete cds (JF412667.1)
10. Nucleotide sequence of Homo sapiens TNF receptor-associated protein 1, partial cds (JX481354.1)
11. Nucleotide sequence of Cucumis sativus ascorbate peroxidase gene, complete cds (KC839995.1)
12. Nucleotide sequence of Momordica charantia ascorbate peroxidase gene, complete cds (KC839996.1)

13. Protein sequence of Homo sapiens osteopontin-C, 61aa (AEA49027.1)
14. Protein sequence of Homo sapiens osteopontin-D, 47aa (AEA49028.1)
15. Protein sequence of Homo sapiens matrix metalloproteinase-9, 13 aa (AEA49029.1)
16. Protein sequence of Homo sapiens osteopontin-D, 292aa (AEA49030.1)
17. Protein sequence of Homo sapiens osteopontin-C, 287aa (AEA49031.1)
18. Protein sequence of Homo sapiens TNF receptor-associated protein 1, 676 aa (AFS69159.1)
19. Protein sequence of Cucumis sativus ascorbate peroxidase, 249 aa (AGJ72850.1)
20. Protein sequence of Momordica charantia ascorbate peroxidase, 249 aa (AGJ72851.1)



JOURNAL ARTICLES PUBLISHED:
1. Bitter Gourd (Momordica Charantia) Peroxidase in decolorization of dyes from tannery effluent, Recent Research in Science and Technology, 2010, 2(2), 49-53. (Indexed in Chemical Abstracts, DOAJ and Google scholar)
2. Studies on Biochemical changes in Mangoes due to artificial Ripening, Int. J. Agri. Sci. (IJAS), (ISSN: 0976-450X), 1(4), 347-355, 2010. (Impact Factor: 3.29).
3. Enzymatic and Non-Enzymatic anti-Oxidant status of Breast Cancer patients in Tamilnadu - International Journal of Pharma and Bio Sciences (IJPBS) (ISSN: 0975-6299), 2(4), B46-B53, 2011. (Impact Factor: 2.598 and H-Index: 6.0).
4. Histopathology of breast cancer patients in Tamilnadu: Tumor grading and staging through NPI - Journal of Pharmacy Research (JPR) (ISSN: 0974-6943), 4(10), 3635-3637, 2011. (Impact Factor: 2.667).
5. Mineral status of female breast cancer patients in Tamilnadu, International Journal of Research in Pharmaceutical Sciences (IJRPS) (ISSN: 0975-7538), 3(4), 618-621, 2012 (IC Value: 5.44 and H-Index: 7.0).
6. Molecular Mechanism of Interaction between Human Sweet Taste Receptors and Antidiabetic agents of Gymnema Sylvestre through Docking StudiesInternational Journal of Research in Phytochemistry and Pharmacology (IJRPP) (ISSN: 2231-010X), 2(4), 164-170, 2012 (IC Value: 5.09).
7. In silico identification of novel polynucleotide vaccine target across avian flu viral vaccine strains, International Journal of Current Biotechnology (IJCB) (ISSN: 2321-8371), 1(1), 1-4, 2013 (IC Value: 4.74 and Indexed in Google scholar).
8. Biochemical evaluation of urine and serum sample of patients with nephrolithiasis in Pondicherry, International Journal of Applied Biochemistry (IJAB) (ISSN: 2349-5421), 1(1), 5-10, 2013 (Indexed in DRIJ and Google scholar).
9. Tertiary structure prediction and identification of druggable pocket in the cancer biomarker - Osteopontin-c, Journal of Diabetes and Metabolic Disorders (J Diabetes Metab Disord.) (ISSN: 2251-6581), 13(1):13, 2014 (Indexed in PubMed, Scopus and Google scholar).
10. Mitochondrial Reprogramming Regulates Breast Cancer Progression. Clinical Cancer Research (Clin Cancer Res) (Print ISSN: 1078-0432; Online ISSN: 1557-3265), Feb 17. pii: clincanres.2456.2015, 2016 doi:10.1158/1078-0432.CCR-15-2456 (Impact factor: 8.722; H-index - 233).
11. Analysis of EWAG-BBD pathway prediction system for the identification of malathion degrading microbes. Bioinformation (Print ISSN: 0973-8894; Online ISSN: 0973-2063), 13(3):73-77, 2017 (IC Value: 5.28; H-index : 18; and Indexed in Google scholar).
12. Identification of New Inhibitor against Mycobacterium tuberculosis using Structure Based Drug Designing and Docking Studies. Research Journal of Pharmacognosy and Phytochemistry (Print ISSN: 0975-2331; Online ISSN: 0975-4385), 9(3):173-176, 2017.
13. Identification of new snake venom zinc Metalloproteinase inhibitor using docking studies from Plectanthus amboinicus. Asian Journal of Research in Pharmaceutical Sciences [AJPSci] (Print ISSN:  2231-5640; Online ISSN:  2231-5659), 7(3):132-134, 2017.



AWARDS AND PRIZES RECEIVED:
1. First Prize won in International level technical symposium - Crosslinx10
2. Faculty Award - 2010 for services at Sri Sankara Arts and Science College, Enathur
3. Best Teacher Award - 2012 for teaching at Sri Sankara Arts and Science College, Enathur.
4. Best Performer Award - 2017 for Additional Controller of Examination at Sri Sankara Arts and Science College, Enathur.



LECTURES DELIVERED:
1. Inservice training programme for Secondary Grade Teachers - 2004
2. Inservice training programme for Govt. Higher Secondary School Biology Teachers - 2006
3. Inservice training programme for Secondary Grade Science Teachers - 2007
4. Scientific Awarness programme for School students of Kanchipuram, Thiruvallur and Vellore Districts - 2007
5. Scientific Lecture, Thirumalai Chemicals Ltd, Ranipept, TamilNadu - 2008
6. Invited Lecture, Biomedical Science Department,Bharathidasan University, Thiruchirappali - 2010
7. Inservice training programme for Secondary Grade Science Teachers - 2010
8. Special Lecture, Two days state level intensive orientation camp for NSS Volunteers - 2011
9.  Special Lecture delivered in Special Campp for NSS Volutneers at Government High School, Enathur on 29 January 2014.
10.  Special Lecture delivered in Youth Force inaugural function for NSS Volunteers at Sri Sankara Arts and Science College, Enathur on 8th August 2014.
11. Guest Lecture delivered on "Biodiversity" at Theivanai Ammal College for Women (Autonomous), Villupuram on 26th September 2014.
12. Guest Lecture delivered on “Structure Based Drug Design” at two days National Seminar on “Recent Trends in Biotechnology” on 23rd and 24th of March 2017 at Department of Biotechnology, University of Madras, Chennai - 600 025.
13. Guest Lecture delivered on “Recent Trends in Biochemistry” on 5th of October 2017 at Department of Biochemistry, Annai Therassa Arts and Science College, Thirukazhukundram - 603 109.
14. Special Lecture delivered in NSS Special Camp for NSS Volunteers at Government High School, Enathur on 05th February 2018.
15. Special Lecture delivered at one day National Conference on "Clinical Applications of Biomaterials" SANMICROFEST - 2018 on 22nd of February 2018 at Department of Microbiology, Sri Sankara Arts and Science College, Enathur - 631 561.



PAPERS PRESENTED:
1. Dye degradation by Momordica Charantia Peroxidase in International level technical symposium - Crosslinx'10
2. Drug Designing using plant products - International Conference on Gene Therapy and Phytotherapy in Modern Medicine - 2011
3. "Insilico identification of novel polynucleotide vaccine target across avian flu viral vaccine strains" was presented in National Seminar on "Emerging Trends in Microbial Biotechnology" - 2013.
4.
"DNA Vaccine target identification against HIV viral strains using pairwise and multiple sequence alignment tool" was presented in National seminar on "Recent Advances in Biotechnology and Applied Microbiology" - 2014.
5. "Phytoremediation of Tannery Effluent using Momordica Charantia Peroxidase" was presented in National seminar on "Innovative Research in Biological Science (NSIRBS)" which was organized by Govt. Thirumagal Mills College, Gudiyatham - 632 604 during 19th December 2014.
6. "Determination of new splice variant in breast cancer patients - Osteopontin-D" was presented in International seminar on “Scitech-15” which was organized by Nadar Saraswathi college of Arts and Science, Theni - 625 531 during 21st January 2015.
7. "Determination of biopesticide azadirachtin by HPLC in Azadirachta indica, Murraya koenigii and Curcuma longa - Medicinal plants" was presented in National Seminar on "Emerging Trends in Microbial and Environmental Biotechnology" organized by Department of Microbiology, Kanchi Shri Krishna College of Arts and Science, Kilambi - 631 551 was held at Kilambi during 6th March 2015.
8."Decolorization of tannery effluent through biological conversion process by Cucumis sativus fruit extract - Phytoremediation" was presented in National Conference on "Emerging Trends and New Challenges in Biotechnology - Bioenergy" organized by PG and Research Centre in Biotechnology, M.G.R College, Hosur - 635 109 was held at Hosur during 18th and 19th February 2016.
9."Computational interaction analysis of Pesticide Permethrin with different Metabolic Proteins in Humans - Nanomolecular interaction studies" was presented in International Conference on Frontiers in Nano Biotechnology (ICFNB'17) held on September, 8 and 9th, 2017, Department of Biotechnology and Bioinformatics, Bishop Heber College (Autonomous), Tiruchirappalli, Tamil Nadu, India.
10. "Identification of New Target and Drug against Salmonella typhi using Homology and Docking Studies" was presented in National Conference on Interdisciplinary Research and Innovations in Biosciences (NATCON 2018) held on 24th and 25th January, 2018, Department of Biochemistry, Mohamed Sathak College of Arts and Science (Autonomous), Chennai 600 119, Tamil Nadu, India.



POSTERS PRESENTED:
1. Parkin reduces Alpha-synuclein phosphorylation in Parkinson's Disease - Neucell'11
2. "New therapeutic strategies for diabetes mellitus" was presented in National Conference on "Diabetes and its Implications" - 2012
3. "Biotreatment of Tannery Industrial Effluent using Momordica Charantia - Phytoremediation" was presented in  National Symposium on "Entrepreneurship Development for Life sciences ED Bioz'13" - 2013.
4. "Overview of occurrence, symptoms and prevention of breast cancer" was presented in two day National Seminar cum Conference on "Applications of green technologies for separation bioproducts" which was organized by Department of Biotechnology, Sree Sasta Institute of Engineering and Technology, Chembarabakam, Chennai - 600 123 was held at Chennai during 02nd and 03rd September, 2015.



PARTICIPATION IN ACADEMIC AND ADMINISTRATIVE COMMITTEES
:

1. Served as the Member of Biochemistry subject of XI and XII for the preparation of syllabus for Higher Secondary Classes by State Council of Educational Research and Training, Chennai 600 006 during 2012-2013.
2.
 Served as the Member of Biochemistry subject of XI and XII for the preparation of Text Book for Higher Secondary Classes by State Council of Educational Research and Training, Chennai 600 006 during 2013-2014.
3. Served as the Doctoral Committee member for Research Scholar Mr.S. Magesh, in Department of Biomedical Science, Bharathidasan University, Trichy - 620 024.
4. Academic Council member of University of Madras from 15.02.2017 to 14.02.2020 from the letter no V1/AC-TEACH/01-2017/087 dated 14th Feb 2017.



EDITORIAL BOARD:
1. Editorial Board member as Associate Editor for the journal "Bhamathi - Microbiology News Letter" (ISSN: 2231-136X) Volume -2, Issue-1, January-July 2012 onwards.
2. Editorial Board member as Associate Editor for the Proceedings "Proceedings of Elixir-2012" (ISBN:978-93-81992-03-6) published by Research and Seminar Committee,  Sri Sankara Arts and Science College, Enathur during 10th and 11th October 2012.
3. Editorial Board member as Executive Editor for the journal "International Journal of Current Biotechnology" (ISSN: 2321-8371) Volume -1, Issue-1, March 2013 onwards.
4. Editorial Board member as Section and Layout Editor for the journal "Asian Journal of English and Linguistics (AJEL)" Volume -1, Issue-1, June 2013 onwards.
5. Editorial Board member as Chief Editor for the journal "International Journal of Applied Biochemistry (IJAB)" (ISSN: 2349-5421) Volume -1, Issue-1, December 2013.
6. Editorial Board member as Executive Editor for the journal "International Journal of Comprehensive Nursing (IJCN)" (ISSN: 2349-5413) Volume -1, Issue-1, June, 2014.



ROLE OF EXAMINER:
1. Served as Question Paper Setter for Bharathidasan University, Thiruvalluvar University, SRM University, St. Joseph College of Arts and Science (Autonomous) and DKM College for Women.
2. Served as Answer Sheet Evaluator for Madras University, Bharathidasan University, Ethiraj College for Women (Autonomous) and
St. Joseph College of Arts and Science (Autonomous).
3. Served as Practical Examiner for Madras University, Ethiraj College for Women (Autonomous) and
Bharathidasan University.
4.
Served as Additional to Chief Superintendent and Assistant Chief Examiner for Madras University Theory Examinations.
5. Served as Chief Invigilators for TNPSC Examinations from 2007- 2014.



PARTICIPATION IN ACADEMIC AND ADMINISTRATIVE COMMITTEES AT COLLEGE LEVEL:
  1. College Committee - Staff representative
  2. Controller of Examination office - Additional Controller of Examination
  3. Controller of Examination office - Controller of Examination
  4. Academic Council - Member of College
  5. Academic Council - Member of University of Madras
  6. Bioinformatics Committee - Co-ordinator
  7. Examination Committee - Convenor
  8. Attendance Committee - Convenor
  9. Environment Committee - Convenor
  10. Research Committee - Member
  11. Sports Committee - Member
  12. Stock verification Committee - Convenor
  13. Value added course - Convenor
  14. IQAC Committee - Member
  15. NAAC Steering Committee - Member
  16. Autonomous Steering Committee - Member



INTEREST:
Research, Teaching and Reading Books


REFEREES:
1. Prof. S. Niranjali Devaraj,
Head and Professor,
Department of Biochemistry,
University of Madras,
Guindy Campus,
Chennai - 600 025.

2. Dr. K. Sathiyamoorthy,
Assistant Professor,
Department of Bio-Medical Science,
School of Basic Medical Science,
Thiruchirappalli - 620 024.

3. Dr. K. R. Venkatesan,
Principal,
Sri Sankara Arts and Science College,
Enathur, Kanchipuram - 631 561.

(S.SIVAKUMAR)


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